TACA stands for Tool for the Automation of Cleanup and Analyses, and basically it is a set of tools used in the National Genomics Infrastructure for easing the day-to-day tasks of managing and organizing projects and data.
To install TACA latest stable version, just use: pip install taca, for the latest
development version, use pip install git+git://github.com/SciLifeLab/TACA.git.
Once it is installed, to get help just use the --help option. You can use the
--help option on every TACA subcommand to get specific command help. For example
taca --help will give you
Usage: taca [OPTIONS] COMMAND [ARGS]...
Tool for the Automation of Storage and Analyses
Options:
--version Show the version and exit.
-c, --config-file FILENAME Path to TACA configuration file
--help Show this message and exit.
Commands:
analysis Analysis methods entry point
storage Storage management methods and utilities
And taca storage --help will give you
Usage: taca storage [OPTIONS] COMMAND [ARGS]...
Storage management methods and utilities
Options:
-d, --days INTEGER Days to consider as thershold
-r, --run PATH
--help Show this message and exit.
Commands:
archive Archive old runs to SWESTORE
cleanup Do appropriate cleanup on the given site i.e.